Coding

Part:BBa_K4025001

Designed by: Manini Penikalapati   Group: iGEM21_Lubbock_TTU   (2021-10-16)


ChiS inter-membrane protein

ChiS is a hybrid sensor kinase originating from the Vibrio cholerae chitin utilization program that is codon-optimised for E. coli. ChiS differs from prototypical two-component signal transduction pathways in that it plays the role of both the sensor kinase and the response regulator. In the presence of chitin (chitin-CBP complex bound to ChiS), ChiS favors dephosphorylation of its receiver domain, allowing it to directly bind and activate Pchb.

ChiS was transformed into plasmid backbone pSB1k03 and a growth curve was constructed to measure cell burden. See: https://2021.igem.org/Team:Lubbock_TTU/Contribution.

As can be seen from the growth curves, the L1 transcriptional unit with ChiS did not overly burdened cell growth– all transformed cells survived. It should be noted; however, that the OD600 readings of all cultures were not standardized prior to inoculation, seen by the varying y-intercepts of all growth curves. Because of this, this data should not be used as quantitative measurements of growth kinetics, but rather a qualitative demonstration of relative growth.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
//cds/membrane/receptor
Parameters
biologyThis CDS originates from the Vibrio cholerae genome (chitin utilization program)
chassisWe expressed this CDS in E. coli DH5a.
proteinThis CDS expresses the intermembrane one-component protein ChiS