Coding

Part:BBa_K3796006

Designed by: Zheng yang   Group: iGEM21_CAU_China   (2021-09-17)
Revision as of 03:31, 21 October 2021 by Yang Feiyue (Talk | contribs)


α- Ketoglutarate dehydrogenase（odhA） from C.glutamicum ATCC 13032

This part encodes α- Ketoglutarate dehydrogenase(odhA). Our plan is reducing its transcription efficiency to reduce the amount of succinyl coA and increase the amount of glutamate. In our project, we changed its rbs to a weaker one to gain more glutamate.

Usage and Biology

The products of coding gene(odhA) can catelyze the conversion of α- Ketoglutarate to succinyl CoA.
By changing its original rbs to a weaker one, the expression of odhA can be reduced, the amount of succinyl CoA would be reduced and glutamate would be increased.

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal EcoRI site found at 976
    Illegal PstI site found at 203
    Illegal PstI site found at 1399
    Illegal PstI site found at 1459
    Illegal PstI site found at 1498
    Illegal PstI site found at 1771
    Illegal PstI site found at 3076
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 976
    Illegal PstI site found at 203
    Illegal PstI site found at 1399
    Illegal PstI site found at 1459
    Illegal PstI site found at 1498
    Illegal PstI site found at 1771
    Illegal PstI site found at 3076
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 976
    Illegal BglII site found at 467
    Illegal BglII site found at 1028
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal EcoRI site found at 976
    Illegal PstI site found at 203
    Illegal PstI site found at 1399
    Illegal PstI site found at 1459
    Illegal PstI site found at 1498
    Illegal PstI site found at 1771
    Illegal PstI site found at 3076
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal EcoRI site found at 976
    Illegal PstI site found at 203
    Illegal PstI site found at 1399
    Illegal PstI site found at 1459
    Illegal PstI site found at 1498
    Illegal PstI site found at 1771
    Illegal PstI site found at 3076
    Illegal NgoMIV site found at 237
    Illegal NgoMIV site found at 3448
    Illegal AgeI site found at 1090
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 1800
    Illegal BsaI site found at 3324
    Illegal BsaI.rc site found at 1228
    Illegal BsaI.rc site found at 1294
    Illegal BsaI.rc site found at 2302
    Illegal BsaI.rc site found at 2345
    Illegal BsaI.rc site found at 2494
    Illegal SapI.rc site found at 2512


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Parameters
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