Composite

Part:BBa_K5378019

Designed by: pan zhao   Group: iGEM24_SMU-GDMU-CHINA   (2024-09-28)
Revision as of 06:53, 2 October 2024 by Zhaopan (Talk | contribs)


PtynA-RBS-GFP

This part adds GFP to BBa_K5378009, which is used to determine whether or not the sensing module will operate effectively.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


Usage and Biology

Usage and Biology

This part is used to determine whether or not the sensing module will operate effectively.

example
Figure 1. CAPTION_HERE

Functional Verification

To demonstrate that PEA, a reliable risk factor of HE identified by the current work of our secondary PI (see details in our Design page) , could initiate the downstream gene circuit, we first engineered Escherichia coli Nissle 1917(EcN) to produce FeaR and TynA constantly by transforming EcN with plasmid Pcon-tynA-Pcon-feaR. Thereby, PEA could be degraded by the enzyme TynA into PAG and PAG could bind with FeaR as a transcriptional factor, which could activate the inducible promoter PTynA. Then we transformed the engineered EcN with plasmid PTynA-GFP to demonstrate the feasibility and efficiency of sensing module via fluorensence (Figure 2).

example
Figure 2.Schematic representation of the construction and mechanism of engineered EcN with sensing module. CAPTION_HERE

After coculturing with 0, 5, 25, 50 and 100ng/ml PEA for 12 hours, results showed a significant increase in fluorensence under microscopy, along with the the increased level in PEA concentration (Figure 3), suggesting a successful expression and high feasibility of the sensing module. Moreover, the fluorescent intensity under different concentrations of PEA throughout 24 hours also verified that our engineered EcN could indeed be more sensitive to the increase in PEA concentration (Figure 4).

example
Figure 3.Fluorescence Intensity with 100ng/ml, 50ng/ml, 25ng/ml, 5ng/mland 0ng/ml PEA cocultured in engineered EcN. CAPTION_HERE
example
Figure 4.Fluorescence observation of the Pcon-FeaR-Pcon-TynA and PTynA-GFP engineered bacteria fluid cocultured with different concentrations of PEA. CAPTION_HERE

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Categories
Parameters
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