Plasmid

Part:BBa_K5302020

Designed by: Xinyuan Shi   Group: iGEM24_USTC   (2024-10-01)
Revision as of 10:05, 1 October 2024 by Xiaotian (Talk | contribs)


pBBR-OmpA-Z3C

Just like miniZ, Z3C is also derived from three helix 58-residue Z-domain of staphylococcal protein A, but it has three helix. Z3C also shows great affinity with VEGF(KD=41 nM).

We used pBBR plasmid as a backbone and transfered Z3C into Escherichia coli Nissle 1917, and finally succeeded in expressing Z3C.

Jamboree Program
Figure 1. Colony PCR results of pBBR-OmpA-Z3C

Jamboree Program
Figure 2. SDS-PAGE analysis of pBBR1MCS-OmpA-Z3C expression in Escherichia coli Nissle 1917 (1)

Jamboree Program
Figure 2. SDS-PAGE analysis of pBBR1MCS-OmpA-Z3C expression in Escherichia coli Nissle 1917(2)

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal EcoRI site found at 4100
    Illegal XbaI site found at 3140
    Illegal PstI site found at 1967
    Illegal PstI site found at 3128
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 4100
    Illegal PstI site found at 1967
    Illegal PstI site found at 3128
    Illegal NotI site found at 1008
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 4100
    Illegal BglII site found at 1754
    Illegal BamHI site found at 3146
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal EcoRI site found at 4100
    Illegal XbaI site found at 3140
    Illegal PstI site found at 1967
    Illegal PstI site found at 3128
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal EcoRI site found at 4100
    Illegal XbaI site found at 3140
    Illegal PstI site found at 1967
    Illegal PstI site found at 3128
    Illegal NgoMIV site found at 2418
    Illegal NgoMIV site found at 2701
    Illegal NgoMIV site found at 4758
    Illegal AgeI site found at 3789
    Illegal AgeI site found at 4598
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 1330
    Illegal SapI.rc site found at 2267
    Illegal SapI.rc site found at 2477


[edit]
Categories
//plasmid
Parameters
biologyEscherichia coli Nissle 1917