Coding

Part:BBa_K5398613

Designed by: ziyi guo   Group: iGEM24_NAU-CHINA   (2024-09-20)
Revision as of 15:05, 20 September 2024 by Registry (Talk | contribs)

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Codon-Optimized EL222 Regulatory Element, improved from Part:BBa_K2332004

Our team has optimized the codon usage of the natural photosensitive DNA-binding protein EL222, originally from the marine bacterium Erythrobacter litoralis HTCC2594, for efficient expression in Escherichia coli. In the dark, EL222 remains in its inactive form, where the N-terminal LOV domain suppresses the DNA-binding activity of its C-terminal HTH domain. Upon exposure to blue light (450nm), the interaction between the LOV and HTH domains is released, allowing the protein to dimerize and bind to its specific DNA target regions. By optimizing the codon usage, we have significantly enhanced its expression in E. coli, providing a more efficient tool for light-controlled gene regulation studies.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 320
    Illegal BamHI site found at 138
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 196
    Illegal AgeI site found at 306
  • 1000
    COMPATIBLE WITH RFC[1000]


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Categories
Parameters
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