Coding

Part:BBa_K5143014

Designed by: Lilya Wreyford LeSang   Group: iGEM24_UnivLyon1-INSALyon   (2024-07-30)
Revision as of 18:11, 31 July 2024 by Lilya (Talk | contribs)


mRuby2 : reporter Red Fluorescent Protein

Protein Description

Description

mRuby 2 is a red fluorescent protein that was engineered to monitor biochemical processes in living cells using changes in Fluorescence Resonance Energy Transfer (FRET). Therefore, mRuby2 can be used as a reporter system. Here, mRuby2 was used as a transcriptional reporter, to control the transcriptional efficiency of the yeast promoter pADH1 (Part:BBa_I766556). The excitation wavelength is 559nm and the emission wavelength is 600nm.

Construction

The mRuby2 used was synthetized based on a sequence from a yeast toolkit so the sequence is optimized for expression in Saccharomyces cerevisiae. In our genetic construction, the gene mRuby2 was synthetized in fusion with the secretion signal AGA2 (Part:BBa_K5143020) in 5' and a 6XHis tag in 3'. See the composite part here : https://parts.igem.org/Part:BBa_K5143021

References

1. Lam, A. et al. Improving FRET dynamic range with bright green and red fluorescent proteins. Nat Methods 9, 1005–1012 (2012). 2. Lee, M. E., DeLoache, W. C., Cervantes, B. & Dueber, J. E. A Highly Characterized Yeast Toolkit for Modular, Multipart Assembly. ACS Synth. Biol. 4, 975–986 (2015).



Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


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Categories
Parameters
None