Composite

Part:BBa_K4645020

Designed by: Meng Sun   Group: iGEM23_HZAU-China   (2023-10-11)
Revision as of 12:17, 12 October 2023 by Felicitysm (Talk | contribs)


The two-component system of S. mutans senses the CSP to regulate the expression of ClyR

CSP is a quorum sensing signaling molecule of S. mutans, and its concentration is positively correlated with the amount of S. mutans. ComD is a membrane-bound histidine kinase (HK) capable of autophosphorylation in response to sensing CSP. The response regulatory factor (RR) ComE then catalyzes the transfer of phosphorylated groups to aspartic residues in its receptor region. Phosphorylated ComE (P-ComE) is allosterically transformed into an active conformation that binds upstream to the CSP-sensitive promoter nlmC and activates transcription. Then expressing ClyR, a chimeric lysin, is composed of a catalytic domain from PlyC and a cell-wall binding domain from PlySs2. ClyR can recognize and lyse the cell wall of S. mutans and avoids the biofilm formed by S. mutans on the surface of our bacteria.

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal EcoRI site found at 627
    Illegal EcoRI site found at 1985
    Illegal XbaI site found at 3288
    Illegal PstI site found at 1027
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 627
    Illegal EcoRI site found at 1985
    Illegal NheI site found at 7
    Illegal NheI site found at 30
    Illegal PstI site found at 1027
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 627
    Illegal EcoRI site found at 1985
    Illegal XhoI site found at 3240
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal EcoRI site found at 627
    Illegal EcoRI site found at 1985
    Illegal XbaI site found at 3288
    Illegal PstI site found at 1027
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal EcoRI site found at 627
    Illegal EcoRI site found at 1985
    Illegal XbaI site found at 3288
    Illegal PstI site found at 1027
    Illegal AgeI site found at 2608
    Illegal AgeI site found at 2692
    Illegal AgeI site found at 3007
    Illegal AgeI site found at 3190
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 1823
    Illegal BsaI.rc site found at 2262


Gene Design in Circuits

The circuit of the adhesion part is as follows (Figure 1).

Figure 1. Gene circuit of adhesion part.

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