DNA

Part:BBa_K4765109

Designed by: Siliang Zhan   Group: iGEM23_Fudan   (2023-09-30)
Revision as of 10:19, 10 October 2023 by Zhenmaoye (Talk | contribs) (Aggregation Assay)

Twister P1 + T7_RBS + intimin-MVN fusion + stem-loop

contributed by Fudan iGEM 2023

Introduction

We’ve developed an E. coli-cyanobacteria adhesion module by transfecting intimin-MVN fusion. Intimin-MVN fusion is composed of intimin and MVN. MVN is a lectin isolated from the cyanobacteria Microcystis aeruginosa PCC7806 and it was tested by iGEM14_Peking. Intimin which includes a short N-terminal signal peptide to direct its trafficking to the periplasm, a LysM domain for peptidoglycan binding, and a beta-barrel for transmembrane insertion[1] , possesses the outer membrane anchoring of MVN. We’ve constructed this fusion protein into our ribozyme-assisted polycistronic co-expression system:pRAP.

Usage and Biology

This biological component delivers MVN to the surface of E. coli, facilitating adhesion between E. coli and Microcystis aeruginosa PCC7806. We envision that the adhesion between cyanobacteria and E. coli can promote the exchange of substances within the biofilm, enhancing the biofilm's survivability.

Characterization

Sequencing map

contributed by Fudan iGEM 2023
Figure1 Sequencing map of MVN

Sequencing starts from the T7 terminator, with the primer 5-GCTAGTTATTGCTCAGCGG-3.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 1305
    Illegal SapI site found at 2058


Reference

  1. Piñero-Lambea, C., Bodelón, G., Fernández-Periáñez, R., Cuesta, A. M., Álvarez-Vallina, L., & Fernández, L. Á. (2015). Programming controlled adhesion of E. coli to target surfaces, cells, and tumors with synthetic adhesins. ACS Synthetic Biology, 4(4), 463–473. https://doi.org/10.1021/sb500252a
[edit]
Categories
//collections/biofilm
Parameters
protein