Composite

Part:BBa_K4275042

Designed by: Wei Zijian   Group: iGEM22_GreatBay_SCIE   (2022-10-12)
Revision as of 10:26, 12 October 2022 by Jerryatcg (Talk | contribs) (Sequence and Features)


pT7-RBS-OlpB-Ag3-tT7

This composite part is designed for the expression of secondary scaffoldin of the cellulosome complex with the scaffoldin part modified to contain 3 type II cohesin domain and had its anchoring domain changed to an antigen domain. The protein is paired with strong promoter and strong terminator tested suitable for the expression of the coding sequence. The fusion protein is expressed and the antigen domain can interact with nanobody domain to use in cell surface display and the type II cohesin domain can fix the primary scaffoldin subunits to construct cellulosome complexes

Usage and Biology

The protein can also be used in surface display by antigen-nanobody interactions because there is an antigen domain fused at C-terminus. The secondary scaffoldin subunit part contain multiple type II cohesin domain for the specific cohesin-dockerin interactions for fixing the primary scaffold components of the cellulosome complex for assembling of the cellulosome complex nanomachine.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 2058
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal XhoI site found at 746
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 1292
    Illegal NgoMIV site found at 1381
    Illegal AgeI site found at 223
    Illegal AgeI site found at 359
    Illegal AgeI site found at 410
    Illegal AgeI site found at 542
    Illegal AgeI site found at 908
    Illegal AgeI site found at 926
    Illegal AgeI site found at 1352
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal SapI.rc site found at 1109
    Illegal SapI.rc site found at 1121
    Illegal SapI.rc site found at 1745


References

1. Anandharaj, Marimuthu et al. "Constructing A Yeast To Express The Largest Cellulosome Complex On The Cell Surface". Proceedings Of The National Academy Of Sciences, vol 117, no. 5, 2020, pp. 2385-2394. Proceedings Of The National Academy Of Sciences, https://doi.org/10.1073/pnas.1916529117.


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