Composite

Part:BBa_K4509420

Designed by: Vibha Murali, MARIE JYOTSNA JAWAHAR, Rhea Harry William   Group: iGEM22_REC-CHENNAI   (2022-09-28)
Revision as of 03:41, 12 October 2022 by Marie JJ (Talk | contribs)


HORSERADISH PEROXIDASE with constitutive promoter J23116

The enzyme horseradish peroxidase, found in the roots of horseradish catalyzes the oxidation of various organic substrates by hydrogen peroxide. It is a metalloenzyme with many isoforms; the most studied type is C. The composite part starts with the J23116 constitutive promoter, continues with RBS and is followed by the Horseradish Peroxidase coding sequence. The sequence ends with a terminator and a BamH1 restriction site.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 7
    Illegal NheI site found at 30
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 445
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 565
    Illegal AgeI site found at 719
    Illegal AgeI site found at 1022
  • 1000
    COMPATIBLE WITH RFC[1000]



Characterization

The promoter J23119 was replaced with J23116 and transformed into E.coli K12 MG1655. The Transformed colonies were cultured and OD was taken every 30 mins to plot the growth curve of the cells.

hrp-116-1.png

The growth curve for the HRP plasmid with J23119, J23116, J23106 and J23100 is plotted in this graph. The burden on cells are indirectly proportional to cell viability. Looking at the growth curve it may be observed that the growth of J23116 is much efficient than J23119. Thus the part has an improved cell growth

Cell Burden

J23116 has a burden range of -4.5 ± 2.8%

[edit]
Categories
Parameters
None