Composite
Part:BBa_K4335021
Designed by: Hang Zhang Group: iGEM22_UESTC-BioTech (2022-10-10)
pCrU6.3+insert site+SpScaffold+polyT Term
BBa_ K4335021 consists of a terminator, a cloning site, SpScaffold and a terminator
PCrU6.3 is a previously characterized RNA from chromosome 8 of Chlamydomonas reinhardtii [1]
Template of sgRNA. Use Golden Gate (BsaⅠ) to replace the template sequence with a ~20bp guide sequence. Add 'ACTT' on the 5'-terminal of your guide sequence and 'AAAC' on the reverse 5'-terminal.
Usage
pCrU6.3+insert site+SpScaffold+polyT Term is one of the core functional components of plasmid pTX2038 and pTX2040 Its main function is to express specific sgRNA, and combine with HSP70A Promoter+3×Flag+NLS+SpCas9+NLS+Rbcs2 Term [BBa_K4335020]works together to cut specific genes in the nuclear genome of Chlamydomonas reinhardtii, so as to knock out negative lipid related regulatory genes.Result
Verification of the effect of Golden Gate inserting specific sgRNA
Sequence and Features
Assembly Compatibility:
- 10INCOMPATIBLE WITH RFC[10]Illegal PstI site found at 48
Illegal PstI site found at 121 - 12INCOMPATIBLE WITH RFC[12]Illegal PstI site found at 48
Illegal PstI site found at 121
Illegal NotI site found at 453 - 21COMPATIBLE WITH RFC[21]
- 23INCOMPATIBLE WITH RFC[23]Illegal PstI site found at 48
Illegal PstI site found at 121 - 25INCOMPATIBLE WITH RFC[25]Illegal PstI site found at 48
Illegal PstI site found at 121 - 1000INCOMPATIBLE WITH RFC[1000]Illegal BsaI site found at 551
Illegal BsaI.rc site found at 533
[edit]
Categories
Parameters
None |