Coding

Part:BBa_K4323002:Design

Designed by: Jessica Marinelli, Kevin Lim, Chun Hin Wong   Group: iGEM22_UManitoba   (2022-09-30)
Revision as of 00:14, 1 October 2022 by Registry (Talk | contribs)

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Truncated FitD


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 909
    Illegal BamHI site found at 1019
    Illegal BamHI site found at 2568
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 2191
  • 1000
    COMPATIBLE WITH RFC[1000]


Design Notes

We use bioinformatics tools and literature to determine possible regions to truncate and to keep. Since most transmembrane domains are located within the core 1300-2200 bp, we decide to use this as our design.


Source

Pseudomonas protegens

References