Coding

Part:BBa_K4212004

Designed by: Shirin Bamezai   Group: iGEM22_Imperial_College_London   (2022-09-29)
Revision as of 15:44, 29 September 2022 by Registry (Talk | contribs)

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CotZ_ChiS

This part codes for a fusion protein consisting of the B. subtilis native CotZ anchor protein and a B. pumilus chitinase enzyme. The CotZ protein localizes in the outer coat of B. subtilis spores, enabling spore display and greater accessibility to . In this case with the chitinase fusion, spores will display chitinases on the surface capable of breaking down chitin into its monomer components, such as N-acetylglucosamine. In the context of our project, the chitinase activity enables us to equip spores with the ability to breakdown the chitin-rich outer coat of fungal pathogens, not only inhibiting their activity but generating chitin monomers that can function as a biomarker, as well as an inducer of plant systemic immune response. This fusion includes a rigid linker, to reduce steric hindrance between the two protein domains and enable greater chitinase activity. The same was selected for testing following dry lab modelling.

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal EcoRI site found at 705
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 705
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 705
    Illegal BglII site found at 48
    Illegal BamHI site found at 690
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal EcoRI site found at 705
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal EcoRI site found at 705
  • 1000
    COMPATIBLE WITH RFC[1000]


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Categories
Parameters
None