Coding

Part:BBa_K3760003

Designed by: Ha Buer   Group: iGEM21_LZU-CHINA   (2021-10-01)
Revision as of 16:14, 20 October 2021 by GreyCrescent (Talk | contribs) (Result)


T7 promoter + hACE2 target RNA coding sequence

A T7 promoter is added to 5' end of hACE2 gene (human angiotensin converting enzyme 2) This part is the template for RNA in vitro synthesis. The product will be the mRNA of hACE2 used in verification of RfxCas13d 's cleavage activity in virto.

Result

The double-stranded DNA (dsDNA) carrying T7 promoter sequence were prepared by PCR. Then the transcription reaction was carried out with DNA templates using the T7 High-Efficiency Transcription Kit (TransGen Biotech) at 37°C (1 h). The RNA was purified by the Easy Pure RNA Purification Kit (TransGen Biotech) and quantified with Nanodrop.Then purified RNA’s quality was assayed by nondenaturing agarose gel electrophoresis.

Figure 1 Purified products of in virto transcription on nondenaturing agarose gel.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 525
    Illegal BamHI site found at 1090
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 2442
    Illegal SapI site found at 28
    Illegal SapI site found at 315


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Categories
Parameters
None