Coding

Part:BBa_K3487005

Designed by: Jianhua Zhou   Group: iGEM20_SZPT-CHINA   (2020-10-09)
Revision as of 14:52, 10 October 2021 by Tjm (Talk | contribs)


Non-specific endonuclease

Description

RalR acts as a non-specific endonuclease that can cleave methylated and unmethylated DNA, then leading to cell death. As a novel type I TA system, RalR is the first toxin that functions as an endonuclease in E. coli. Y.X. Guo,et al found that RalR in E. coli functions differently, acting as a toxin by cleaving DNA, and that it belongs to a type I toxin–antitoxin system. In our project, we used RalR as a toxin protein to cleave the DNA of host cell to avoid the bacterial escape.In our project,we used RalR as a toxin protein to  cleave the DNA of host cell  to avoid the bacterial escape. We test the function of this toxin protein in E. coli. The result is as follow. 11111


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


2020 SZPT-CHINA

Result

We streaked the engineered strain into a 1Mm IPTG plate for overnight culture, and observed that the engineered strain containing the RalR gene did not grow on the plate. The expression of RalR was good under the positive and negative controls, and the colony situation in the corresponding area was significantly less than that of the empty vector control group. The result is as follow.

T--SZPT-China--RalR.png

References

Guo Y, Quiroga C, Chen Q, et al. RalR (a DNase) and RalA (a small RNA) form a type I toxin-antitoxin system in Escherichia coli. Nucleic Acids Res. 2014;42(10):6448-6462.

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