Composite

Part:BBa_K3409009

Designed by: Lucie Pesenti   Group: iGEM20_Ionis_Paris   (2020-10-20)
Revision as of 08:00, 26 October 2020 by Albane Mabro (Talk | contribs)


Expression of receptor binding protein (gp37) on the outer membrane of Escherichia coli

Contains the elements necessary to recognize and bind an Escherichia coli bacteria.The major component is the gene product (gp) 37 which codes for the T4 bacteriophage recpetor binding protein (RBP) conferring the ability to recongize another target bacteria (E.coli in this case). Gp37 will be directed to the outer membrane of our model organism, E. coli K12. This will be achieved thanks to the co-expressed Lpp-OmpA gene. The Lpp-OmpA is an existing part designed by the NCTU-Formosa team in 2015 (Part: BBa_K1694002). It consists of a N-terminal acids of the lipoprotein (Lpp) sequence followed by amino acids of outer membrane protein A (OmpA). By fusing gp37 to the C-ter end of Lpp-OmpA, it can be displayed on the outer membrane of E. coli. This BioBrick also contains a cleavage site, the TEV cleavage site, which is a unique cleavage site of the cysteine protease from the Tobacco Etch Virus (TEV). This cleavage site is followed by a His-tag in case of a purification step which can be performed with Ni2+ chromatography columns.

Two chaperones proteins (gp38 and chaperone protein 57A) are present as well for the physical appearance of the gp37.

Characterization

Revelation of the presence of gp37 via immunofluorescence labelling

IF EXPECTED.png

The aim was to detect the receptor binding protein gp37 expressed and directed to the membrane thanks to the co-expressed Lpp-OmpA genes. This is achieved using fused His-tag placed after the OmpA and before the gp37. Thus, the His-tag was targeted with a primary monoclonal anti-his antibody conjugated to a fluorescence marker, fluorescein isothiocyanate (FITC), which has excitation and emission spectrum peak wavelengths of approximately 495 nm/519 nm, detectable with a fluorescence spectrophotometer.

Bibliography

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 7
    Illegal NheI site found at 30
    Illegal NheI site found at 3774
    Illegal NheI site found at 3797
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 849
    Illegal BglII site found at 2043
    Illegal BglII site found at 3820
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 438
    Illegal NgoMIV site found at 2223
    Illegal AgeI site found at 1191
    Illegal AgeI site found at 3875
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 2426


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Categories
Parameters
None