Coding

Part:BBa_K3697000

Designed by: Christopher Neimeth, Lauren Ramlan   Group: iGEM20_Stanford   (2020-10-22)
Revision as of 00:12, 24 October 2020 by Lramlan (Talk | contribs)


mCherry BSU

This is the coding sequence for producing a codon-optimized mCherry in B. subtilis. mCherry is a derivative of RFP. mCherry_BSU was created by codon-optimizing an E. coli mCherry for expression B. subtilis. When paired with a strong RBS and constitutive promotor (BBa_K3697010), mCherry_BSU can be quantified using a plate reader, and transformed B. subtilis colonies can be moderately red to the naked eye.

mCherry_BSU has an excitation peak at 585 nm and a peak emission at 615 nm.

Fluorescence levels in B. subtilis and E. coli can be quantified using a fluorescent plate reader. Under high enough expression from a strong constitutive promotor such as pVeg (BBa_K143012), red colonies may be visible to the naked eye. E. coli expressing mCherry_BSU are red under natural light.

This protein can be used as a reporter in B. subtilis due to it's high visibility.

This part does not have a degradation tag.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 4
    Illegal AgeI site found at 715
  • 1000
    COMPATIBLE WITH RFC[1000]


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Categories
Parameters
None