Protein_Domain

Part:BBa_K3582004

Designed by: Saillesh Aravindhan C   Group: iGEM20_IISER-Pune-India   (2020-10-20)
Revision as of 16:09, 20 October 2020 by Sailleshac (Talk | contribs)


The DBLb domain of PF11_0521 PfEMP1

This biobrick is thought to be able to produce the DBLb domain of PfEMP-1. Plasmodium falciparum erythrocyte membrane protein 1 EMP1 is encoded by the clonally variant var gene family with approximately 60 members per parasite genome. The adhesion process of the PfEMP1 proteins is often described as a way for the parasite to evade splenic clearance and has also been reported as associated with vascular obstruction of vital organs leading to major pathological events.[1]. These proteins are also known for their ability to mediate adhesion of IEs to host receptors in the vasculature.[2]

The binding of PfEMP1 to ICAM-1 is mediated by a subset of Duffy binding-like (DBL) domains, the DBLβ domains, which are found in either A-type or BC-type PfEMP1.[4][5][6][7]. The PfEMP1 protein to the D1 domain of ICAM-1[3].


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 1407
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 1113
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
Parameters
None