DNA
spacer

Part:BBa_B0040

Designed by: Vinay S. Mahajan, Brian Chow, Peter Carr   Group: Antiquity   (2003-01-31)
Revision as of 01:49, 30 April 2006 by Registry (Talk | contribs)


Spacer.1 (generic)

Generic spacer for ensuring a 70 bp distance between the end of the suffix of the BioBrick part containing the double terminator and the prefix of the BioBrick part containing the promoter of the new gene. Please, use the AlignX function of Vector NT to check for homology with the components in your plasmid before using this spacer.

Usage and Biology

It is not clear if spacers are needed or not in the final assembly. A spacer could compensate for any steric hindrance effect on recruiting the transcriptional machinery at the promoter of the next module in the assembly line; such an effect could be induced by the supercoiling that results when the transcription of the previous module is taking place. However, there is no direct evidence that this may cause a problem, and therefore the argument in favor of using a spacer remains speculative.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]

Functional Parameters

[edit]
Categories
//classic/other/uncategorized
//DNA/spacer
Parameters
None