Part:BBa_K817002

PfadBA

Team NTHU Taiwan contributed to the characterization of effects and inducing of fatty acid to E.coli and Relative Fluorescence to Anderson Promoter.
(--chiuhua 14:47, 17 October 2019 (UTC))

It's a fatty acyl-CoA responsive promoter which will express the downstream gene in the presence of fatty acid.

Method

To evaluate the P_fadBA promoter function, we design a P_fadBA-mRFP reporter construct. In experimental group we add oleic acid in media and compared to control group, which is the same colony and identical amount of bacteria but without addition of oleic acid. After 5 hr induction we measure the man fluorescence intensity to get the expression level of P_fadBA promoter in either group.

However, the baseline expression of the reportor gene (mRFP) downstream of P_fadBA is so high that we cannot see significant signal rise after induction of fatty acid (oleic acid). Therefore, we decide to lower the baseline expression by overexpression of FadR, an endogenous repressor of P_fadBA, whose repressive function is antagonized by fatty acyl-CoA. [3] By co-transforming constructs with P_fadBA and FadR into the bacterial platform, it is made capable of changing gene expression in response to environmental fatty acid concentration.

Protocol

1. 10 μL bacterial culture was cultured in 5 mL LB at 37。C, with suitable concentration of antibiotics shaking for 18 hr.
2. For experimental group, 480 μL of bacteria culture was transferred to 1.5 mL eppendorf tube and added with 20 μL of oleic acid and IGEPAL(detergent) in. For control group, 500 μL bacterial culture was added in 1.5 mL eppendorf tube.
3. The tubes were incubated at 37℃ 5 hr for induction.
4. 100 μL of bacterial culture was transferred tino 96-well plate. The mRFP fluorescence intensity was measured (Excitaion: 580 nm, Emmision: 610 nm).

Data

Oleic acid induction group shows higher expression of mRFP.

Conclusion

Our P_fadBA promoter can work in response to environmental fatty acid change, which acts as an important sensor for our bacterial device – secreting GLP-1 when host is fed with fatty diet.

Sequence and Features

Assembly Compatibility:

• 10
  COMPATIBLE WITH RFC[10]
• 12
  COMPATIBLE WITH RFC[12]
• 21
  COMPATIBLE WITH RFC[21]
• 23
  COMPATIBLE WITH RFC[23]
• 25
  COMPATIBLE WITH RFC[25]
• 1000
  COMPATIBLE WITH RFC[1000]