Coding

Part:BBa_K3132020

Designed by: Qiliang Yang   Group: iGEM19_SMMU-China   (2019-10-16)
Revision as of 13:14, 16 October 2019 by Registry (Talk | contribs)

(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)


SynNotch-anti-HER2

In our SynNotch system, we retained the functional sequence of the transmembrane domain from α-CD19 Notch. At the N-terminus, we used anti-HER2 scFV(BBa_K3132005) as the extracellular domain of our synNotch recepter to specifically recognize HER2, the tumor surface antigen we chose as the target, so that our engineered NK cells obtain the ability to response to HER2 on the surface of the cancer cell. We put Gal4-VP64 (a fusion protein) in the downstream of the transmembrane domain, as the intracelluar domain of the synNotch. In the presence of tumor marker antigen HER2, SynNotch protein will be cleaved, and thus Gal4-VP64 fusion protein will be detached from the cell membrane. The released Gal4-VP64 will be located into nuclei and recognize UAS sequence in its corresponding promoter UAS_MinimalCMV (BBa_K3132004) and then these two proteins combine together, which enable our CAR and IL-2 gene expressed with high efficiency, performing killing activity and inducing signal molecules secretion. The relevant experiments have confirmed our our expectations.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NotI site found at 1642
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 56
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 985
    Illegal NgoMIV site found at 1162
    Illegal NgoMIV site found at 1700
    Illegal NgoMIV site found at 1748
    Illegal NgoMIV site found at 1883
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal SapI.rc site found at 1321


[edit]
Categories
Parameters
None