Composite
Part:BBa_K2909012:Design
Designed by: Laurent CHEN Group: iGEM19_Sorbonne_U_Paris (2019-08-28)
Revision as of 15:34, 28 August 2019 by Laurent CHEN (Talk | contribs)
HiBiT-DGAT-1-2_HygroR E. guineensis
Assembly Compatibility:
- 10INCOMPATIBLE WITH RFC[10]Illegal EcoRI site found at 5
Illegal EcoRI site found at 3104
Illegal PstI site found at 2389 - 12INCOMPATIBLE WITH RFC[12]Illegal EcoRI site found at 5
Illegal EcoRI site found at 3104
Illegal NheI site found at 3368
Illegal PstI site found at 2389
Illegal NotI site found at 217 - 21INCOMPATIBLE WITH RFC[21]Illegal EcoRI site found at 5
Illegal EcoRI site found at 3104
Illegal BglII site found at 2297
Illegal BamHI site found at 2537
Illegal XhoI site found at 758
Illegal XhoI site found at 1020 - 23INCOMPATIBLE WITH RFC[23]Illegal EcoRI site found at 5
Illegal EcoRI site found at 3104
Illegal PstI site found at 2389 - 25INCOMPATIBLE WITH RFC[25]Illegal EcoRI site found at 5
Illegal EcoRI site found at 3104
Illegal PstI site found at 2389
Illegal NgoMIV site found at 4069
Illegal NgoMIV site found at 4251 - 1000INCOMPATIBLE WITH RFC[1000]Illegal SapI.rc site found at 2575
Design Notes
Source
The DGAT-1-2 enzyme (BBa_K2909003) comes from the predicted sequence from the E. guineensis genome sequencing.
NCBI Reference Sequence: XM_010933834.1
https://www.ncbi.nlm.nih.gov/nuccore/XM_010933834.1
The C-terminal HiBiT tag (BBa_K2909001) comes from Promega (Schwinn et al. 2018).
All the other parts comes from the Chlamydomonas reinhardtii MoClo Kit (Crozet et al. 2018).
References
- Schwinn, M. K. et al. CRISPR-Mediated Tagging of Endogenous Proteins with a Luminescent Peptide. ACS Chem. Biol. 13, 467–474 (2018).
- Crozet, P. et al. Birth of a Photosynthetic Chassis: A MoClo Toolkit Enabling Synthetic Biology in the Microalga Chlamydomonas reinhardtii. ACS Synth. Biol. 7, 2074–2086 (2018).
- 1.Weber, E., Engler, C., Gruetzner, R., Werner, S. & Marillonnet, S. A Modular Cloning System for Standardized Assembly of Multigene Constructs. PLoS ONE 6, e16765 (2011).