Plasmid_Backbone

Part:BBa_K2656200

Designed by: Carolina Ropero   Group: iGEM18_Valencia_UPV   (2018-09-21)
Revision as of 13:53, 15 October 2018 by Carolinarp (Talk | contribs)


pBIOBRICKATOR

It is a modification of the pSB1C3 backbone to receive transcriptional units previously assembled in a [http://2018.igem.org/Team:Valencia_UPV/Design#Level1 GB alpha 1] vector. To do so, it includes two divergently orientated BsmBI Type IIS recognition sites, whose cleavage leaves equivalent overhangs to those of the alpha 1 BsmBI digestion.

Thus, it can be used to adapt any transcriptional unit assembled into an alpha 1 GB vector into a BioBrick compatible vector, so adapting it into the BB grammar.

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal prefix found at 5
    Plasmid lacks a suffix.
    Illegal SpeI site found at 921
    Illegal PstI site found at 935
  • 12
    INCOMPATIBLE WITH RFC[12]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 5
    Illegal NheI site found at 44
    Illegal NheI site found at 67
    Illegal SpeI site found at 921
    Illegal PstI site found at 935
    Illegal NotI site found at 11
    Illegal NotI site found at 928
  • 21
    INCOMPATIBLE WITH RFC[21]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 5
    Illegal XhoI site found at 1952
    Illegal XhoI site found at 2844
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal prefix found at 5
    Illegal suffix found at 921
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal prefix found at 5
    Plasmid lacks a suffix.
    Illegal XbaI site found at 20
    Illegal SpeI site found at 921
    Illegal PstI site found at 935
    Illegal AgeI site found at 653
    Illegal AgeI site found at 765
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.


[edit]
Categories
Parameters
None