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Part:BBa_K2474000:Experience

Designed by: J. Baggman, J. Bergqvist, H. Karlsson, L. Karlsson, J. Larsson, M. Lindberg, M. Nilsson, M. Peterson, O. Reinhed Gustafsson, S. Stridh Karppinen & J. Ybrahim   Group: iGEM17_Linkoping_Sweden   (2017-10-27)
Revision as of 14:20, 1 November 2017 by Moani870 (Talk | contribs) (User Reviews)


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Applications of BBa_K2474000

User Reviews

A dot-blot and a fluorescent measurement was preformed to confirm the function of this BioBrick which contains Amyloid-Beta and the fluorescent protein mNeonGreen. The results from the dot-blot can be seen in figure 1 compared to figure 2. Table 1 is a scheme explaining figure 1. From these figures, we could confirm that our bacteria was expressing proteins which have epitopes that the antibodies, specific to Amyloid-Beta, could bind to. This is confirmed by comparing the 4 marks in the second column with the 4 negative marks in the first. By the black marks in figure 1, where we added cell lysate from induced BL21 containing our BioBrick, we confirm the expression of Amyloid-Beta. From the weaker marks we confirm there is some leakage from the promoter.


Table 1:

Empty Bl21 uninduced Bl21 with BBa_K2474000

Empty Bl21 uninduced Bl21 with BBa_K2474000

Empty Bl21 induced Bl21 with BBa_K2474000

Empty Bl21 induced Bl21 with BBa_K2474000


For measurement of fluorescent of this BioBrick we used a spectrophotometer.


T--Linkoping Sweden--mNG-AB.jpg

BL21(DE3) cells were transformed with BBa_K2474000 and grown first in 50 ml conical tubes and then diluted with LB (with chloramphenicol) to an OD of 0.4. They were then distributed in a 96 well plate in 8 replicate at each of the 4 induction levels (5 mM, 1 mM, 0.2 mM and 0 mM). Empty bacteria (BL21(DE3)) were also included on the plate to serve as a control. All measurements were done with an infinite M1000 pro plate reader. Due to technical difficulties and lack of an mNeonGreen fluorescent standard curve it was impossible to present this data in the preferred unit (µM/OD). The data points represent the mean value of the replicates and the error bars represent 95 % confidence intervals

From the graph we can see that the promoter and fluorescent parts of our BioBrick works as expected as the fluorescence is highly proportional to the arabinose concentration. We can also see that the promoter have a small leakage in its regulation as transformed bacteria without arabinose (purple in figure X) show more fluorescence than empty bacteria.

This graph in combination with the dot-blot above confirms that our biobrick (BBa_K2474000) is fully functional. >BBa_K2474000 StartReviews</partinfo> UNIQb894e273e6ee76a3-partinfo-00000000-QINU