Coding

Part:BBa_K2262014

Designed by: CHEN, PENG-TZU   Group: iGEM17_NCTU_Formosa   (2017-10-24)
Revision as of 01:41, 31 October 2017 by Peng-Tzu (Talk | contribs)

(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)


Pelophylaxin-4


Figure 1. Pe-4


Introduction


      It is a basic part of Pe-4(BBa K2262013) and was predicted to have anti-fungal function by Parabase System. See more in BBa_K2262013.



Scoring Card Predict

      Pe-4 got 408.83 points from the Anti-fungal Scoring Card of Parabase System, which was created by NCTU_Formosa. The grade is over 353, the threshold to divide whether a peptide has an anti-fungal function probability, that means Pe-4 has a high probability to have an anti-fungal function.

Figure 2. The sequence of Pe-4.
The colors of each amino acids represent the probability of anti-fungal dipeptides.



Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
Parameters
None