Coding

Part:BBa_K2262012

Designed by: CHEN, PENG-TZU   Group: iGEM17_NCTU_Formosa   (2017-10-24)
Revision as of 01:38, 31 October 2017 by Peng-Tzu (Talk | contribs)

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Brevinin-1E


Figure 1. B-1E


Introduction


      It is a basic part of B-1E(BBa_K2262011) and was predicted to have anti-fungal function by Parabase System. See more in BBa_K2262011.


Scoring Card Predict

      B-1E got 402.91 points from the Anti-fungal Scoring Card of Parabase System, which was created by NCTU_Formosa. The grade is over 353, the threshold to divide whether a peptide has an anti-fungal function probability, that means B-1E has a high probability to have an anti-fungal function.



Figure 2. The sequence of B-1E.
The colors of each amino acids represent the probability of anti-fungal dipeptides.



Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


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Categories
Parameters
None