Reporter

Part:BBa_K2429019

Designed by: Nia Myrie   Group: iGEM17_MIT   (2017-10-23)
Revision as of 21:56, 23 October 2017 by Registry (Talk | contribs)

(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)


3 Exon eYFP Reporter

This part consists of 3 exons: the first exon is made of sequence for a "conserved" region that most fluorescent proteins share. The second intron is made of the The second exon is made up of the sequences unique to YFP, as well as the remaining parts of the fluorescent protein. The third exon is very similar to the second, except instead of sequences unique to yellow fluorescence, it has sequences unique to blue. In between the conserved region and YFP exon is the second human beta globin (HBG) intron, and in between the YFP exon and BFP exon is the first HBG intron.

We used this construct to determine whether our RNA binding proteins (dCas13a or Ms2) were successful in controlling the exclusion of an exon.

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal EcoRI site found at 2282
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 2282
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 2282
    Illegal BamHI site found at 1
    Illegal BamHI site found at 1412
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal EcoRI site found at 2282
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal EcoRI site found at 2282
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
Parameters
None