Composite

Part:BBa_K1983015

Designed by: Vykintas Jauniškis   Group: iGEM16_Vilnius-Lithuania   (2016-10-13)
Revision as of 12:37, 22 October 2016 by Vykintas (Talk | contribs)


PheP and tRNA-Phe under constitutive promoters

Overview

This biobrick part contains two coding elements: (BBa_K1983014): PheP, which is labeled with N-6XHis-Tag and put under a constitutive promoter (BBa_K823005), high strength RBS 9BBa_J61132) and terminator (BBa_B0017). A basic biobrick part (BBa_K1983011): tRNA-Phe (pheU) under constitutive promoter and terminatorPheP (Phenylalanine-specific permease) is a natural phenylalanine membrane transporter of the bacterium Escherichia coli.

PheP is a single integral membrane transporter which selectively transports L-phenylalanine and L-tyrosine as an antiporter using proton motive force. The activity of this transporter under natural expression is known to be 9 and 17,5 nmol/mgDW(cells) for L-phenylalanine and L-tyrosine respectively [1].

pheU gene from Escherichia coli encodes a tRNA transporting L-phenylalanine and is under an upstream constitutive promoter and a terminator found after the tRNA gene.

Experiments and results

Cloning

This part was created by fusing a fragment received from IDT that contains a part (BBa_K1983014) with a biobrick part (BBa_K1983011) inside a pSB1C3 backbone. The received sequences were amplified using Uni-FW/RV primers and digested with EcoRI and SpeI. The fragments were cloned into pSB1C3 vector containing (BBa_K1983011) digested with EcoRI and XbaI.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 7
    Illegal NheI site found at 30
    Illegal NheI site found at 98
    Illegal NheI site found at 1669
    Illegal NheI site found at 1692
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


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Parameters
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