Coding

Part:BBa_K1639005

Designed by: Mustafa Yılmaz   Group: iGEM15_ATOMS-Turkiye   (2015-09-12)
Revision as of 08:40, 21 September 2015 by Mustafa26 (Talk | contribs)

H-NS(T108I)

global DNA-binding transcriptional dual regulator H-NS mutant form.

Usage and Biology

Donato and Kawula investigated the effect on bacterial motility of random point mutations in the HNS protein. As a result of their Swarm plate assay and experiments for the determination of flagellar rotational speed, it was found that some random mutations (HSN-T108I and HNS-A18E) resulted in bacteria with a stronger and faster flagella as compared with wild type bacteria. This single amino acid change caused a 50% increase in the binding of HNS to FliG.. It was also shown that this single amino acid change in HNS resulted in an approximately 50% increase in flagellar rotation speed and about a 2-fold increase in the bacteria’s swarm size.

Figure 1: H-NS-FliG cross-linked complexes. Reactions were incubated at room temperature and equal amounts were electrophoresed on denaturing poly acrylamide gels. A, Coomassie-stained 4–20%SDSpolyacrylamidegradient gel; B, 12% SDS-polyacrylamide gel transferred to nitrocellulose, and probed with H-NS antiserum; C, second half of gel in B probed with FliG antiserum. Protein. Standard sizes are indicated by lines; lmw, low molecular weight markers; hmw, high molecular weight markers; protein monomers, dimers, and H-NS-FliG complexes are indicated by arrows. Reactions for all panels: 1, wild-type H-NS only; 2, H-NST108I only; 3, FliG only; 4, wild-type H-NS with cross-linker; 5, H-NST108I with cross-linker; 6, FliG with cross-linker;7, 1:1 molar ratio of wild-type H-NS to FliG with cross-linker; 8, 1:1molar ratio of H-NST108I to FliG with cross-linker.
Figure 2: Swarm plate assay. Fresh colonies from strains carrying the indicated alleles were inoculated onto semi-solid agar plates and grown at 30 °C. Growth was measured as the diameter of the bacterial swarm over several time points. Bacteria with swarm diameters under 10 mm at the end of 17 h incubation were considered non-motile. Data representative of three individual experiments. *, vector; f, hns2-tetR; ,,wild-type HNS; l, hnsT108I; l, hnsA18E..
Figure 5: Flagella propel bacteria by rotating motor-driven helical filaments (35, 36) whereby swimming speed is directly related to flagellar rotational speed (39). Gina M. Donato and Thomas H. Kawula1 , in another experiment which they tried to compare rotational speeds of mutant and wild-type bacteria, they concluded that hnsA18E and hnsT108I accelerated flagellar speeds 44–62% over wild-type levels.

In the results from fluorescence anisotropy and chemical cross-linking, Donato and Kawula showed that there is an interaction between HNS and FliG, the protein responsible for flagellar torque; and they show that the mutant form of HNS binds FliG 50% more often than does wild-type HNS: They explain the increase in the bacteria’s swarm rate and swim speed caused by mutant HNS thusly “We position H-NS at the interface between the rotor and stator, directly linked to the C terminus of FliG(Fig. 5 A). Tighter binding of mutant H-NST108I toFliG (Fig.5 B) may cause increases in flagellar speed by altering the conformation of FliG relative to the other rotor proteins and/or the MotA·B complex, thus, compacting the motor complex and allowing fast errotation by creating less friction within the surrounding stationary MotA·B ring complex (56).

ATOMS-Turkiye incmot 1.5.png

This study having captured our attention, we decided to use mutant HNS to increase flagellar speed and torque power.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BamHI site found at 2
    Illegal XhoI site found at 426
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal SapI.rc site found at 162


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Categories
Parameters
n/aH-NS(T108I)