Coding

Part:BBa_K1616003

Designed by: Johanna Chesnel   Group: iGEM15_IONIS_Paris   (2015-09-17)
Revision as of 12:44, 17 September 2015 by Chesne j (Talk | contribs)

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VVD link to YC155 (YFP Cter split)

Vivid (VVD) is the smallest known Light–oxygen–voltage (LOV) domain protein and photo-inducible dimer. Isolated from Neurospora crassa, VVD forms a homodimer in response to a blue-light stimulus. Then, a split protein is a protein whose sequence has been divided into two (or more) different parts. The yellow-fluorescent (YFP) protein will only express fluorescence when its two parts will be reunited. The part is coding for the homodimer VVD link by an integration of specific sequence to the C terminal of the YFP split.



Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


Design Notes

The sequence of VVD had 2 illegal sites PstI; that have been removed.


Source

Assembly the sequence of photoreceptor VVD (without illegal site), a linker(1) and then the C terminal of YFP split(1)


References

(1) Tom Kerppola, Ph. D, investigator at the Howard Hughes Medical Institute as well as Professor in the University of Michigan

Hu CD, Chinenov Y, Kerppola TK. Visualization of interactions among bZIP and Rel family proteins in living cells using bimolecular fluorescence complementation. Mol Cell. 2002;9(4):789–98.

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