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Coding

Part:BBa_K1761002

Designed by: Laura van Smeden   Group: iGEM15_TU_Eindhoven   (2015-09-03)
Revision as of 17:27, 3 September 2015 by Registry (Talk | contribs)

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Outer Membrane Protein X (OmpX) with BsoBI-linker and NanoLuc

OmpX is an outer membrane protein with the C- and N-termini in the intracellulair domain. To be able to use OmpX as a scaffold, a non-natural amino acid needs to be introduced. This can be done by implementing the amber stop codon TAG in one of the loops of OmpX via a mutation. With a specific tRNA an azide-functionalized amino acid can be built in, which can be used for the SPAAC click chemistry reaction with DBCO functionalized groups. The BsoBI linker is a 213 bp long flexible GGSGGS linker. Using the restriction enzyme BsoBI, the linker can become 45 bp shorter. NanoLuc is a small sized and bright luciferase. Under the addition of furimazine, the NanoLuc luciferase generates a bioluminescece emmission spectrum with a maximum around 460 nm.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 769
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
//cds/membrane
//function/reporter/light
Parameters
emission460 nm