Regulatory

Part:BBa_J119376:Design

Designed by: Anthony Eckdahl   Group: Eckdahl Lab   (2015-03-21)
Revision as of 13:10, 27 March 2015 by Eckdahl (Talk | contribs) (→‎Design Notes)


Psimp1 Promoter with Four Consensus Variants


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


Design Notes

The consensus sequence from De Mey et al. (2007 MC Biotechnol 7:34)shown below was used to generate a promoter that has a simple sequence by using W=A, N=G, R=G, and D=G, but avoiding runs of 4 or more Gs or Cs. The resulting promoter was named Psimp1.

De Mey 2007 Figure 1.jpg

Source

Synthetic oligonucleotides.

References