Reporter
LacZ

Part:BBa_K1444017

Designed by: Dan Ziemianowicz   Group: iGEM14_Calgary   (2014-10-09)
Revision as of 03:24, 18 October 2014 by DCurran (Talk | contribs)

Full length beta-galactosidase (LacZ)

Beta-galactosidase (EC 3.2.1.23) is a classic enzyme most commonly used in blue-white colony screening when used in specialized vectors. This part consists of the full length beta-galactosidase sequence which can be inserted downstream of a promoter to produce the tetrameric, 47.4kDa enzyme.

Beta-galactosidase cleaves the beta-glycosidic bond of a galactose bound to an organic moiety; the physiological function is to break down beta-galactosides, such as lactose, into it's respective monnosaccharides. Beta-galactosidase can act as a reporter when provided substrates such as X-gal. The cleavage of X-gal releases galactose and the chromophoric, subtsituted indole moiety. The most common form of X-gal is 5-Bromo-3-indolyl β-D-galactopyranoside, which produces an intense blue pigment. Other versions of X-gal may be used to produce other color pigments.

Typically 40-60uL of a 20ug/mL X-gal solution, dissolved in dimethyl sulfoxide or dimethyl formamide, is spread on a plate and allowed to dry before plating the bacteria expressing beta-galactosidase. X-gal may also be added to liquid cultures or incorporated into solid agar media.


Usage and Biology

This part was amplified from a commonly used expression vector from a molecular biology lab, and cloned into the BioBrick vector pSB1C3. With expression via an appropriate promoter, this part catalyzes the cleavage of lactose into glucose and galactose. In the lab, it most commonly used to cleave the lactose analog [http://en.wikipedia.org/wiki/X-gal X-gal], which after cleavage produces a deep blue colour.

40 uL 20 mg/mL X-gal (2%) 40 uL of 1mM IPTG dissolved in DMSO.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
//function/reporter/color
Parameters
None