Coding

Part:BBa_K1420003

Designed by: Stephen C. Heinsch   Group: iGEM14_Minnesota   (2014-10-09)
Revision as of 02:06, 17 October 2014 by Valeriubortnov (Talk | contribs)

MerP, mercuric transport protein periplasmic component

Overview

merP (0.3Kb) encodes a periplasmic transport protein that serves as part of the mer operon. MerP and the gene merP are highlighted in orange in Figure 1 below. The lower part of Figure 1 shows the arrangement of mer genes in the operon. merP is located downstream of merT, another gene that encodes a mercury transport protein.

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Figure 1. Model of mercury resistance operon. The symbol • indicates a cysteine residue. RSH indicates cytosolic thiol redox buffers such as glutathione. Figure 1 shows the interactions of MerP, in orange, with mercury compounds and other gene products of mer operon. (This figure is adapted from "Bacterial mercury resistance from atoms to ecosystems". Reference: T. Barkay et al. FEMS Microbiology Reviews 27 (2003) 355-384.)

Function

MerP is a 72 amino acid periplasmic transport protein. MerP functions as a monomer with two alpha helices overlaying a four-strand antiparallel beta sheet. As shown in Figure 2, MerP binds a single Hg(II) ion at two conserved cysteine residues, these cysteines define the metal binding motif of MerP. Similar motifs are also found in other proteins that are involved in the transportation of thiophilic metal cations. The MerP cysteine residues take up a Hg(II) ion and remove any attached ligands before passing the ion to the MerT transmembrane protein.

MerP structure.jpg

Figure 2. Structure of MerP as determined by NMR studies. A shows a reduced MerP as viewed from above. B shows a MerP binding a Hg(II) ion, showing the two cysteine residues that become surface exposed. C and D show the protein as viewed down a helix. Reference: R. Steele et. al., "Structures of the Reduced and Mercury-Bound Forms of MerP, the Periplasmic Protein from the Bacterial Mercury Detoxification System". Biochemistry, 1997, 36 (23), pp 6885–6895.


MerP is not essential for Hg(II) uptake, as MerT can import Hg(II) by itself. Additionally, there is the possibility of a Cys14Ser mutation on MerP which blocks Hg(II) uptake by MerT. If merP is expressed alone, it will exist in an oxidized state, which is less stable than the reduced state it is found in when expressed as part of the greater mer operon. In the periplasm, MerP competes with thiol-mediated redox proteins for Hg(II). Like periplasmic nutrient transporters, MerP is the most abundantly synthesized subunit in its operon due to its role in periplasmic Hg(II) transport.

Experimental Results

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For the zone of inhibition studies, 10µL of 0.1M HgCl2 were spotted on a filter disk in the middle of an agar plate. The diameter of the Zone of Inhibition was measured in triplicate. In the linked figure, P. putida shows a smaller zone of inhibition for the strain with the mer operon, as expected. In the E. coli K12 sample, the same relationship between the strain with the mer operon and the empty vector was observed. In addition, the vector with a merA deletion has a higher zone of inhibition, which would be expected as the bacteria would be unable to reduce Hg(II) and remove it, leading to a toxic bioaccumulation that kills the bacteria.










Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
//binding/metal
//cds
Parameters
None