Regulatory

Part:BBa_K1216008

Designed by: Meret Arter   Group: iGEM13_ETH_Zurich   (2013-10-29)
Revision as of 12:50, 30 October 2013 by Niederbm (Talk | contribs)

Variant of the wild-type pLuxR promoter with lower sensitivity

BBa_K1216008: part of a PLuxR collection of promoters with differing AHL sensitivity. This significantly increases usefulness of the Lux signaling system, as differential respones to cell concentrations are enabled. Further they can even be used to detect geometrical settings of colonies.

Usage and Biology

The Lux signaling system is based on positive feedback. The PLuxL promoter drives expression of the upstream LuxR gene. The promoter PLuxR driver expression of the downstream operon including the LuxI AHL synthetase. The promoter encompasses a palindromic operator sequence to which a dimer of LuxR-AHL complexes binds to induce transcription. In absence of this complex, PLuxL is active and thus LuxR is abundant. PLuxR however is inactive, showing slight leakage, yielding a fairly low expression level of LuxI and other downstream gene products.

An important feature of AHL, the "signaling molecule" of the system, is that it diffuses freely through cell walls and surrounding media. This enables communication between cells in vincinity. When a certain cell concentration is reached, the diffusing AHL yields sufficiently high levels of the LuxR-AHL complex within cells. The direct consequence of this is high expression of downstream genes, importantly inculding LuxI (and not so importantly shutting down PLuxL). Now the positive feedback loop is being closed by elevated synthesis of AHL which further increases LuxI synthesis in cells.

In V. Fischeri other downstream genes include a luciferase which is part of a symbiosis with marine animals. Other possibilities are proteins that facilitate biofilm formation and related phenomena.

In (synthetic) biology, this system can be used as a sender/reporter system by separating LuxI and LuxR, where LuxI is not under control of PLuxR, rendering the system independent of cell concentration. LuxR/PLuxR can then be used to drive expression of a myriad of other genes such as various reporter genes.

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


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Categories
Parameters
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