Tag
ssrA(DAS+4

Part:BBa_K1075020

Designed by: Max Schelski   Group: iGEM13_Bonn   (2013-09-23)
Revision as of 18:41, 3 October 2013 by AnnikaS (Talk | contribs) (→‎application)

E. coli ssrA(DAS+4)


construction

The part contains the mutated E. coli ssrA(DAS+4) tag.

biology

The ssrA tag is a short peptide sequence, which is fused to the C-terminus of proteins, which should be degraded. It relates to the protease ClpXP complex in E.coli and it also allows the adaptor proteins SspB binding and delivering substrates to the proteases in order to make the process more efficient. The mutated ecssrA (DAS+4) weakens a direct binding between proteases and ecssrA(DAS+4) and increases the dependance of sspB. [http://www.ncbi.nlm.nih.gov/pubmed/16762842]

application

The ecssrA(DAS+4) tag can be fused to proteins, so they get degraded. The tag can be used by everyone e.g. to research the function of a protein.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 762
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


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Categories
Parameters
None