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Part:BBa_K1189005:Design

Designed by: Sharon Feng   Group: iGEM13_Calgary   (2013-09-16)
Revision as of 22:51, 27 September 2013 by Sharonfeng1 (Talk | contribs)

TALEB Target ([B])


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal AgeI site found at 213
    Illegal AgeI site found at 325
  • 1000
    COMPATIBLE WITH RFC[1000]


Design Notes

We designed primers that would produce these TALE B target sequence in a KAPA PCR reaction. Our target sequences were then ligated into RFP generator, in a pSB1C3 backbone. We expected a sequence of AGCAATGGG in the repeat variable di-residue of the second repeat of TALB, however, the sequence was actually TCCCACGAC. This meant that the required target sequence at this position was a C, and not a T, as the parts registry web page indicates. Therefore, this part has the updated TALB target sequence with C instead of the T.


Source

The target sequence was amplified with primers from the genome of E. coli using polymerase chain reaction.

References