Coding
ATF1
Part:BBa_J45006:Design
Designed by: Veena Venkatachalam Group: iGEM06_MIT (2006-06-07)
alcohol acetyltransferase I (ATF1)
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21INCOMPATIBLE WITH RFC[21]Illegal BglII site found at 99
Illegal BamHI site found at 1426 - 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000INCOMPATIBLE WITH RFC[1000]Illegal SapI.rc site found at 526
Illegal SapI.rc site found at 1534
Design Notes
- Eliminated EcoRI site at base pair 412 by changing base pair 414 from A to G
- forward primer: 5'- GTT TCT TCG AAT TCG CGG CCG CTT CTA GAT GAA TGA AAT CGA TGA G -3'
- reverse primer: 5'- GTT TCT TCC TGC AGC GGC CGC TAC TAG TAT TAT TAa ggg cct aaa agg aga gct ttg -3'
- forward mutagenesis primer: 5' GAA GCA AAT ATT AGA AGA GTT CAA AAA TAG TAA GGG 3'
- reverse mutagenesis primer: 5' CCC TTA CTA TTT TTG AAC TCT TCT AAT ATT TGC TTC 3'
Source
Source: S. cerevisiae, chromosome XV
Sequence obtained from Genbank, accession number [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=Nucleotide&dopt=GenBank&val=1420813 Z75285]
References
<biblio>
- Horton03 pmid=12937998
</biblio>