Translational_Unit
Part:BBa_K772001
Designed by: Mustafa Elitok Group: iGEM12_Fatih-Medical (2012-09-24)
EpCAM Binding Dock: C-terminus
This gene sequence includes an EpCAM (Epithelial Cell Adhesion Molecule) antigen binding domain, OmpA transmembrane protein (dock) and TEV protease C terminus. It is planned to use this subpart with BBa_772, which contains only TEV protease N terminus differently instead of C terminus, in order to induce a signal reaction in the case of EpCAM presence. EpCAM is an natural antigen which is found high significantly in the cases of some breast and colorectal cancer subtypes. On the upstream region of protein sequence, there are a constitutive pLac promoter and appropiate RBS.
To see how this part works: [1]
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12INCOMPATIBLE WITH RFC[12]Illegal NheI site found at 13
Illegal NheI site found at 36 - 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000INCOMPATIBLE WITH RFC[1000]Illegal SapI.rc site found at 441
[edit]
Categories
Parameters
//cds/enzyme/protease
//cds/membrane/receptor
//cds/receptor/antibody
//chassis/prokaryote/ecoli
//function/cellsignalling
//proteindomain/binding
//proteindomain/cleavage
//cds/membrane/receptor
//cds/receptor/antibody
//chassis/prokaryote/ecoli
//function/cellsignalling
//proteindomain/binding
//proteindomain/cleavage
chassis | E.coli TOP10 strain |
device_type | Receptor/Signal Activator |
function | Detection/Signalling |
ligands | EpCAM antigen |
proteins | TEVp C term., OmpA, CD215 antibody |
target | EpCAM antigen |