Plasmid_Backbone

Part:BBa_K812000

Designed by: William Rostain, Tristan Cerisy   Group: iGEM12_Evry   (2012-09-18)
Revision as of 19:49, 26 September 2012 by TriCer (Talk | contribs)

Biobricked pCS2+ plasmid for frogs and chicken

This plasmid is a biobricked version of the standard plasmid pCS2+. This plasmid is made of a bacterial ampicilin reststant backbone, with a universal CMV promoter. The Biobrick site is surrounded by a a 5'UTR expression enhancer, and a ploy-A tail with a SV40 3' UTR that tnhance the stabilisation of the mRNA and the expression of the protein.

This plasmid is ment to be micro-injected in frog eggs or chicken eggs for a transcient expression of the protein at the early ages of development of the embryo. This plasmid does not replicate, so it gets diluted and degraded as the animal grow, leaving no chance for DNA propagation to the breeding.

To use this plasmid, you simply have to insert your gene between the EcoRI and PstI site. It is better to add a kozac sequence in front of your gene to enhance its expression.

This plasmid contains the standard registry insert J04450 as a negative cloning control.

This plasmid was characterized with different reporters.
In Example, the insert J04450 is replaced by the BioBrick K812031 (sfGFP. This new plasmid (K812133) express sfGFP into Xenopus:
perdu

The expression of sfGFP is present only in one out of the two embryo/tadpole. sfGFP is present only in few tissue as others reporters. sfGFP is expressed in tail's muscles and branchial basket for this tadpole. After injection of this plasmid into Xenopus it does not diffuse in the eggs, and the plasmid express sfGFP in few different tissues.
Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 4092
    Illegal SpeI site found at 2
    Illegal PstI site found at 16
    Illegal NotI site found at 9
    Illegal NotI site found at 248
    Illegal NotI site found at 4098
  • 21
    INCOMPATIBLE WITH RFC[21]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 4092
    Illegal BamHI site found at 4077
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal prefix found at 4092
    Illegal suffix found at 2
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal prefix found at 4092
    Plasmid lacks a suffix.
    Illegal XbaI site found at 4107
    Illegal SpeI site found at 2
    Illegal PstI site found at 16
    Illegal NgoMIV site found at 2611
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal BsaI site found at 3532
    Illegal BsaI.rc site found at 1634
    Illegal SapI site found at 551


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Categories
Parameters
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