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Coding
CysI

Part:BBa_K896001:Design

Designed by: Shih-Hao Chen, Yen-Chen Lo,Ting-Yi Lin   Group: iGEM12_NYMU-Taipei   (2012-09-21)
Revision as of 14:19, 26 September 2012 by Lo6203 (Talk | contribs) (References)

CysI (Sulfite reductase)


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal EcoRI site found at 655
    Illegal PstI site found at 121
  • 12
    INCOMPATIBLE WITH RFC[12]
    Unknown
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 655
  • 23
    INCOMPATIBLE WITH RFC[23]
    Unknown
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal EcoRI site found at 655
    Illegal PstI site found at 121
    Illegal NgoMIV site found at 394
    Illegal NgoMIV site found at 580
    Illegal NgoMIV site found at 722
    Illegal AgeI site found at 94
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI site found at 130
    Illegal BsaI site found at 1452


Design Notes

1. Endogenious EcoRI site is at 655bp, and PstI is at 121bp.

2. Instead of mutant ctting site, we create a smart pSB1C3 plasmid (MfeI-XbaI -pSB1C3-SbfI-SpeI)for CysI cloning.

3. Taking advantage of MfeI and EcoRI are compatible; SbfI and XbaI are compatible.

Source

Wildtype sulfite reductase which is originatal from Pseudomonas aeruginosa PAOI w/o engineered.

References

1.cysI - sulfite reductasePseudomonas aeruginosa PAO1. [http://www.wikigenes.org/e/gene/e/878581.html]

2.A novel reduced flavin mononucleotide-dependent methanesulfonate sulfonatase encoded by the sulfur-regulated msu operon of Pseudomonas aeruginosa. Kertesz, M.A., Schmidt-Larbig, K., Wüest, T. J. Bacteriol. (1999)

3.Regulation of the sulfate starvation response in Pseudomonas aeruginosa: role of cysteine biosynthetic intermediates. Hummerjohann, J., Küttel, E., Quadroni, M., Ragaller, J., Leisinger, T., Kertesz, M.A. Microbiology (Reading, Engl.) (1998)

4.Mapping of cysteine genes on the chromosome of Pseudomonas aeruginosa PAO. Brandt, R., Günther, E., Herrmann, H. Mol. Gen. Genet. (1984)