Plasmid_Backbone
pSB3K3
Part:pSB3K3
Designed by: Reshma Shetty Group: Antiquity (2004-06-29)
Low to medium copy BioBrick standard vector
pSB3K3-1 is a medium copy plasmid with kanamycin resistance. It has a p15A pMR101-derived replication origin, copy number 20-30. (Lutz and Bujard, 1997) pSB3K3-1 has a terminator upstream of its MCS, which is oriented to prevent transcription from *inside* the MCS from reading out into the vectorl. A second terminator (E.coli His operon-derived) is downstream of the MCS, again insulating the vector from transcription reading out of the MCS. Ideally, future versions of standard biobrick vectors would have terminators bracketing the MCS that were 100% efficient in terminating transcription both into and out of the MCS region.
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12INCOMPATIBLE WITH RFC[12]Plasmid lacks a prefix.
Plasmid lacks a suffix.
Illegal EcoRI site found at 2729
Illegal NheI site found at 1384
Illegal SpeI site found at 2
Illegal PstI site found at 16
Illegal NotI site found at 9
Illegal NotI site found at 2735 - 21INCOMPATIBLE WITH RFC[21]Plasmid lacks a prefix.
Plasmid lacks a suffix.
Illegal EcoRI site found at 2729
Illegal XhoI site found at 177
Illegal XhoI site found at 1020 - 23INCOMPATIBLE WITH RFC[23]Illegal prefix found at 2729
Illegal suffix found at 2 - 25INCOMPATIBLE WITH RFC[25]Illegal prefix found at 2729
Plasmid lacks a suffix.
Illegal XbaI site found at 2744
Illegal SpeI site found at 2
Illegal PstI site found at 16
Illegal AgeI site found at 1470
Illegal AgeI site found at 1793 - 1000INCOMPATIBLE WITH RFC[1000]Plasmid lacks a prefix.
Plasmid lacks a suffix.
Illegal BsaI.rc site found at 2498
[edit]
Categories
Parameters
//plasmid/measurement
//plasmidbackbone/assembly
//plasmidbackbone/copynumber/medium
//plasmidbackbone/operation
//plasmidbackbone/version/3
//plasmidbackbone/assembly
//plasmidbackbone/copynumber/medium
//plasmidbackbone/operation
//plasmidbackbone/version/3
chassis | |
copies | 10-12 |
insert | None |
mcs | BioBrick |
origin | p15A |
resistance | K |