Protein_Domain
VP64

Part:BBa_J176013

Designed by: Karmella Haynes   Group: Haynes Lab   (2011-09-29)
Revision as of 02:31, 22 November 2011 by Kahaynes (Talk | contribs) (Usage and Biology)

VP64

Tetrameric VP16 transcription activator domain

Usage and Biology

  • Chassis: mammalian cells
  • Mammalian expression vector required
  • Protein domain; requires promoter, start codon, stop codon, and polyA signal for proper expression
  • VP64 doesn't do much as a free-floating domain. Fuse it to a DNA binding domain

VP64 is a transcriptional activator composed of four tandem copies of VP16 (Viral Protein 16 amino acids 437-447, ), which is derived from the herpes simplex virus. When fused to another protein domain that can bind near the promoter of a gene, VP64 acts as a strong transcriptional activator.

Characterization

VP64 activity is sensitive to promoter proximity.
In our hands, VP64 activity is maximized when it is targeted to DNA sequences that are ~40-80 base pairs away from a minimal promoter. When fused to the Gal4 DNA binding domain (BBa_J176020) and targeted it to Gal (UAS) DNA elements (BBa_J176019) that are assembled immediately adjacent to the HSVtkTATA minimal promoter (BBa_J176011), we observe weak activation, and perhaps repression, of a fluorescent reporter gene. In contrast, when a small spacer (BBa_J176039) is inserted between the Gal4 binding sites and the promoter, reporter gene activity greatly increases.

(Data will be posted soon)

Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
//cds/transcriptionalregulator/activator
//chassis/eukaryote/human
//proteindomain/activation
Parameters
chassismammalian cells
functiontranscription
uniprotP06492