Coding

Part:BBa_K415503

Designed by: Joy Jiao, Laura Deming, Adrian Slusarczyk   Group: iGEM10_MIT   (2010-10-27)
Revision as of 04:07, 29 October 2010 by Joy (Talk | contribs)


Figure 1. Schematic depicting the schematic of the TREt system.


EYFP_2a_rtta3_ff5 L1L2 MammoBlock Entry Vector


EYFP_2a_rtTa3_FF5 is a construct containing two proteins - EYFP fluorescent protein, and rtTA3 (a DOX-inducible transcription factor that regulates the TRE promoter) seperated by a viral 2A sequence that allows for bicistronic expression of the two genes. FF5 is a micro-RNA controlled degradation tag. This construct is part of the 2010 iGEM mammalian team toggle switch. The basic TREt system, which is utilized in the toggle, is depicted in Figure 1.


Characterization

Figure 2. Expression of EGSH_EYFP_2a_rtTa3_FF5 Construct Post Ponasterone S Induction in HEK293FT Cells.
Expression of EGSH_EYFP_2a_rtTa3_FF5 Construct Post Ponasterone S Induction in HEK293FT Cells

The EGSH_EYFP_2a_rtTa3_FF construct was introduced into a HEK293FT cell line constitutively expressing VgEcR and RxR via calcium phosphate transient transfection. Fluorescent and brightfield micrographs were obtained 41 and 48 hours post transfection. PonS addition occured at 14 hours.


Figure 3. Comparison of TREt and EGSH reporter constructs.
Comparison of TREt and EGSH Promoter Constructs

In Figure 3, the inducibility of TREt and another inducible promoter, EGSH (Link:[1]), are compared. HEK293 FT cells were infected with reporter constructs for each system. The EGSH system is inducible with ponasterone, and expresses EGFP when induced. The TREt system controls expression of EYFP. Addition of DOX leads to activation of rtTA3, which then induces TREt_EYFP. Controls without inducing chemical factors are shown for both systems. For the EGSH system, (A) indicates the absence and (B) indicates the presence of ponesterone. For the TREt system, (C) indicate the absence and (D) indicates the presence of DOX. Scale bars (red) are 100 μm.

Results

DOX addition led to activation of rtTA3 and dramatic increase in transcriptional activity. This makes the TREt system ideal for inducible, high level expression of proteins, especially lethal or harmful proteins that must be tightly regulated. The TREt system is also widely used in synthetic systems for its rigorous positive feedback loop.

See also: TREt promoter [2].


Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal EcoRI site found at 1666
    Illegal XbaI site found at 816
    Illegal XbaI site found at 1709
    Illegal PstI site found at 225
    Illegal PstI site found at 1671
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 1666
    Illegal NheI site found at 804
    Illegal PstI site found at 225
    Illegal PstI site found at 1671
    Illegal NotI site found at 1560
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 1666
    Illegal BamHI site found at 1697
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal EcoRI site found at 1666
    Illegal XbaI site found at 816
    Illegal XbaI site found at 1709
    Illegal PstI site found at 225
    Illegal PstI site found at 1671
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal EcoRI site found at 1666
    Illegal XbaI site found at 816
    Illegal XbaI site found at 1709
    Illegal PstI site found at 225
    Illegal PstI site found at 1671
    Illegal NgoMIV site found at 774
    Illegal NgoMIV site found at 1433
    Illegal AgeI site found at 8
  • 1000
    COMPATIBLE WITH RFC[1000]


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