Coding
Rci
Part:BBa_K361000
Designed by: Jacky, Fong Chuen, Loo Group: iGEM10_Hong_Kong-CUHK (2010-10-24)
Rci site-specific recombinase
This part will prouce a 384-amino acid Rci site-specific recombinase used in shufflon system, which is a site-specific DNA recombination between two specific repeat sites as recognition.
After this recombinase is being expressed, it can alter the DNA sequence being inserted randomly with the specific repeat sites originally to become an unknown sequence.
This is a Wide type Rci recombinase. In the recombination activity study: Intramolecular inversion frequency = 0.062 Intramolecular deletion frequency = 0 (recombinase inactive on this function)
Intermolecular recombination = 0 (recombinase inactive on this function)
Sequence and Features
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25INCOMPATIBLE WITH RFC[25]Illegal NgoMIV site found at 362
Illegal NgoMIV site found at 857 - 1000COMPATIBLE WITH RFC[1000]
[edit]
Categories
Parameters
//cds/enzyme
//function/recombination
//function/recombination
biology | active wide type enzyme |
function | Site-specific recombination |
protein |