Coding

Part:BBa_K5301000

Designed by: Xing Zhang   Group: iGEM24_BNU-China   (2024-09-21)
Revision as of 01:29, 30 September 2024 by Furina1013 (Talk | contribs)


MSP1E3D1 is a genetically engineered protein, which mimics the function of ApoA-I.

Usage and Biology

Nanodisc technology is a widely applicable approach to render membrane proteins soluble in aqueous solutions in a native-like bilayer environment, where the membrane proteins remain stable and active. The Nanodisc is a non-covalent structure of phospholipid bilayer and membrane scaffold protein (MSP), a genetically engineered protein, which mimics the function of Apolipoprotein A-1 (ApoA-1). The first MSP, MSP1, was engineered with its sequence based on the sequence of A-1, but without the globular N-terminal domain of native A-1. The MSP1E3D1 variant of MSP1 differs from MSP1 in the following facets: (1) It deletes the first 11 amino acids in the Helix 1 portion of the original MSP1 sequence (which is known separately as MSP1D1). The MSP1D1 protein is an N-terminal histidine-tagged protein with a TEV protease cleavage site between the histidine-tag and the protein sequence. (2) It repeats the Helix 4 (H4), Helix 5 (H5) and Helix 6 (H6) sequences of the original MSP1 sequence between the parent Helix 6 (H6) and Helix 7 (H7) segments of MSP1D1.

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal EcoRI site found at 115
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 115
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 115
    Illegal BglII site found at 741
    Illegal XhoI site found at 637
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal EcoRI site found at 115
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal EcoRI site found at 115
  • 1000
    COMPATIBLE WITH RFC[1000]


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Parameters
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