Regulatory

Part:BBa_K4642021

Designed by: Ryan Yapa   Group: iGEM23_City-of-London-UK   (2023-09-28)
Revision as of 16:43, 28 September 2023 by Registry (Talk | contribs)

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Gen4 373-21-24 Double AND-Gate Toehold Switch

Toehold switches are a class of de-novo-designed riboregulators that enable posttranscriptional activation of protein translation through mechanisms employed in artificial systems rather than natural ones. Unlike conventional riboregulators, the switches take advantage of toehold-mediated linear-linear interactions developed in vitro to initiate RNA-RNA strand displacement interactions. Furthermore, they rely on sequestration of the region around the start codon to repress protein translation, eschewing any base pairing to the RBS or start codon itself to regulate translation.

As a result, toehold switches can be designed to activate protein translation in response to a trigger RNA with an arbitrary sequence, enabling substantial improvements in component orthogonality. The absence of binding to the RBS and use of thermodynamically favourable linear-linear interactions also enables facile tuning of translational efficiency via RBS engineering. Consequently, these systems routinely enable modulation of protein expression over two orders of magnitude.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    COMPATIBLE WITH RFC[1000]


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Categories
Parameters
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