Coding

Part:BBa_K1033001

Designed by: Karl Holdar   Group: iGEM13_Uppsala   (2013-08-23)
Revision as of 02:07, 9 October 2022 by Enshixu (Talk | contribs) (iGEM 2020 QHFZ-China, new documentation (For Bronze))

4-coumarate ligase (4CL) with RBS

4-coumarate ligase (4CL) is an enzyme that catalyses the reaction from p-coumaric acid to 4-coumaroyl-coenzyme A (4-coumaryl-CoA). This enzyme is derived from the plant arabidhopsis thaliana, but exists in many other plants. [1]

In our project, we have been using it together with stilbene synthase, that produces resveratrol with the help of this enzyme.

Uppsala_4CL-STS.png

Applications With the help of this enzyme one can produce 4-coumaryl-CoA which is an important precursor in many metabolic pathways. For example, it can be used to produce resveratrol with stilbense synthase. [2]


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 1108
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 1675
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    COMPATIBLE WITH RFC[25]
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 1307


iGEM 2022 iBowu-China, new documentation (For Bronze)

Group: iBowu-China iGEM 2022

Author: Enshi Xv

     In this year’s iGEM competition, SHSBNU_China team focused on anthocyanins production, especially delphinidin. 4CL gene is one of the key gene in the synthetic pathway of delphinidin, which catalyzed phenylalanine into 4-coumaryl coenzyme A.

We synthesized the sequence and constructed into plasmid pETDuet. </p> After transforming to E.coli BL21 and induced by IPTG overnight at 16 degree Celsius at various concentrations (0.25 to 2 uM), we lysed the bacteria and performed SDS-PAGE and we confirmed 4CL enzyme to be expressed successfully. Judged by the thickness of the SDS-PAGE band width and darkness, concentrations of iPTG doesn’t play a critical role in the expression of 4CL enzyme.

File:File:Bronze-1.jpg
Figure 1. The expression test for BBa_K1033001
[edit]
Categories
//chassis/prokaryote/ecoli/nissle
//collections/probiotics/production
Parameters
None