Composite

Part:BBa_K3711047

Designed by: Jiacheng Shi   Group: iGEM21_HUST-China   (2021-10-03)
Revision as of 09:18, 21 October 2021 by Yuanyuan-Zeng (Talk | contribs)


AOX1-α factor-ACC-AOX1 Terminator


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 2440
    Illegal NheI site found at 2938
    Illegal NheI site found at 2980
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal XhoI site found at 1187
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 1898
    Illegal NgoMIV site found at 2658
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Illegal BsaI.rc site found at 1560
    Illegal BsaI.rc site found at 2558
    Illegal BsaI.rc site found at 2862


Description

This is a composite component for expressing ACC outside the cell. ACC is transcribed and translated into Acetyl CoA carboxylase,which is the key enzyme in the synthesis of lycopene. It participates in the transformation from acetyl coenzyme A to malonyl coenzyme . AOX1 promoter is a strong promoter induced by methanol. Under the condition of methanol induction, with the help of α factor, ACC is translated and excreted from the cell.

Usage and Biology

Acetyl-CoA carboxylase (ACC) is a biotin enzyme that can catalyze the reaction of "acetyl-CoA+ATP+HCO3→malonyl-CoA+ADP+Pi". It exists widely in nature. ACC is a rate-limiting enzyme for ab initio synthesis of fatty acids, which catalyzes acetyl-CoA to malonyl-CoA, which eventually forms C16 acyl-CoA. ACC can be divided into multi-subunit ACC and multi-functional ACC. Polysubunit ACC exists in plants and bacteria and consists of four subunits, namely, biotin carboxylase (BC), biotin carboxyl carrier protein (BCCP) and two subunits of carboxyltransferase (CT), α-CT and β-CT. Multifunctional ACC mostly exists in eukaryotes. ACC has been used in the drug design of obesity, diabetes and plant herbicides, and is also a target gene for some crops.

Molecular cloning

Plasmid with target gene is transformed into E.coli. From them, we acquire large amount of target gene using as raw material for further operation.

    • tu**

Using E.coli for amplification, we extract and digest them with Bgl I or Sal I to get linear plasmid, which could be integrated into yeast genome to avoid getting lost while being frozen. Then, concentration of linear plasmid is also applied to achieve higher copy number and higher expression level. Several rounds of electroporation later, we successfully get all the plasmid with AOX1 as promoter into yeast.

      • tu***

SDS-PAGE

After confirmation from colony PCR and sequencing, we using the successfully integrated yeast for expression. At first, we try to detect our target protein in the supernatant since there is signal peptide.

    • tu***
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Categories
Parameters
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