Coding

Part:BBa_K3589105

Designed by: Yannik Schermer   Group: iGEM20_TU_Kaiserslautern   (2020-10-22)
Revision as of 17:55, 22 October 2020 by Registry (Talk | contribs)

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Mutant laccase from Botrytis aclada for Escherichia coli

This basic part contains the coding sequence of the mutant form L499F of the laccase from the ascomycete Botrytis aclada (hereafter referred to as BaLac) (B3). This part is codon-optimized for Chlamydomonas reinhardtii. Combined with the second part of BaLac (XXXXX), a promoter and a terminator, this level 0 construct should mediate the oxidation of a wide variety of substrates including phenolic compounds and aromatic amines. As this part contains the introns 1 and 2 of RBCS2, it perfectly matches the part BBa_K3002027 (pAR promoter A1-B2), resulting in a high expression (Eichler-Stahlberg et al., 2009 ADD LINK). To detect the target protein, a tag of the Kaiser Collection, introduced by TU Kaiserslautern's 2019 iGEM team like, BBa_K3002017 HA-tag) is recommended. This part was designed to allow synthesis due to a high GC-level. It is only functional in combination with the second part (XXXXX) of the laccase. (Visit the page of the part (XXXX) to gain a deeper understanding of the functionality of BaLac.)

Sequence and Features


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal EcoRI site found at 775
    Illegal PstI site found at 463
    Illegal PstI site found at 550
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal EcoRI site found at 775
    Illegal PstI site found at 463
    Illegal PstI site found at 550
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal EcoRI site found at 775
    Illegal BamHI site found at 920
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal EcoRI site found at 775
    Illegal PstI site found at 463
    Illegal PstI site found at 550
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal EcoRI site found at 775
    Illegal PstI site found at 463
    Illegal PstI site found at 550
    Illegal NgoMIV site found at 612
    Illegal AgeI site found at 136
    Illegal AgeI site found at 976
    Illegal AgeI site found at 1059
    Illegal AgeI site found at 1315
  • 1000
    COMPATIBLE WITH RFC[1000]


[edit]
Categories
//awards/basic_part/nominee
Parameters
None